| Friday, Oct 13 |
3.1 Genetic and Biochemical Networks |
10:30 AM |
| 13967 |
Coding Theory Based Maximum-Likelihood Classifier for Translation Initiation
Regions in Escherichia coli K-12 |
Elebeoba May Ms.; Mladen Vouk Dr.; Donald Bitzer Dr.; David Rosnick Mr. |
| 11907 |
An Information Channel Model of Protein Transcription |
William O'NEILL |
| 14857 |
The design and construction of a genetic toggle switch |
James J. COLLINS; Timothy S. Gardner; Charles R. Cantor |
| 15264 |
Function, Design and Evolution of Elementary Gene Circuits |
Michael SAVAGEAU |
| 14852 |
From Genome to Organism: a Virus-World View |
John YIN |
| 14582 |
Analysis of the genetic program: Data mining, simulation, and circuit engineering
for cellular systems |
Adam Arkin |
| Friday, Oct 13 |
3.2 Integrative Modeling from Cell to Tissue and
Organ |
2:00 PM |
| 14530 |
Computational Challenges to Probing Structure-Function in Lung Disease |
Kenneth LUTCHEN Ph.D. |
| 14932 |
Asthma PhysioLab: A Dynamic, Computer-based Mathematical Model of Atopic
Asthma |
David KLINKE II; Annette Lewis; Clement Leong; Nadine Defranoux; Thomas
Paterson; Cynthia L. Stokes |
| 13868 |
A Pulmonary Circulation Physiome |
Christopher Dawson Ph.D; Steven Haworth Ph.D. |
| 14934 |
Simulation of Air Flow in 3-D Model of Central Airways Created from CT Images |
Kara KRUSE; Paul Williams Ph.D.; Richard WARD; Shaun Gleason; Michael Paulus;
Glenn Allgood Ph.D. |
| 14949 |
Modeling Complex Systems in Biomedicine |
Thomas DEISBOECK M.D. |
| Saturday, Oct 14 |
3.3 The Physiome: Strategies for Information Management |
8:30 AM |
| 15259 |
Strategies for Large Scale Systems Modeling |
James BASSINGTHWAIGHTE |
| 14953 |
Building an Infrastructure for the Physiome Project |
Zheng LI; Erik Butterworth; James BASSINGTHWAIGHTE |
| 13912 |
Integrating Medical Models and Biological Databases |
C. Forbes DEWEY Jr.; William Chuang; Orion Richardson; Ngon Dao |
| 14691 |
An Information Management Approach to Describing Virtual Human Models |
Richard WARD |
| 14882 |
XML Languages for Describing Biological Models and Data |
Warren Hedley; Poul Nielsen; Peter Hunter |
| 14928 |
A Tool to Build, Distribute, and Use Computer-Based Biological Models via
the Web |
G. Scott LETT; Mark Grehlinger; Jian Li; Yi Ge; Kam Jim |
| Saturday, Oct 14 |
3.4 Integrative Modeling from Cell to Tissue and
Organ II |
10:30 AM |
| 14787 |
Emergent Behavior in Populations of Insulin-Secreting Cells |
Arthur SHERMAN |
| 14591 |
Cardiac electro-mechanics: cell and tissue modeling |
David Nickerson; Nicolas Smith; Peter Kohl; Peter Hunter |
| 14847 |
Computational Modeling of Ventricular Heterogeneity in the Electrophysiology
of Cardiac Muscle |
Adam MUZIKANT; J. Jeremy Rice; Gang Chen; Thomas Colatsky |
| 15232 |
Modular Simulation of Cardiac Dynamics on Distributed Memory Parallel Computers |
John Pormann; John Board Ph.D.; Craig HENRIQUEZ Ph.D. |
| Saturday, Oct 14 |
3.5 Integrative Modeling of the Cell |
2:00 PM |
| 14879 |
E-CELL Project: Towards computer modeling of the whole cell |
Masaru Tomita |
| 14908 |
The Role of the Plasma Membrane in the Spatiotemporal Control of Intracellular
Signal Transduction |
Jason Haugh |
| 14430 |
Combining Stochastic and Deterministic Methods to Simulate Local Control
by Diadic Ca<sup>2+</sup> During a Ventricular Action Potential. |
Joseph Greenstein; Paul Delmar; Raimond Winslow |
| 14867 |
CALCIUM RELEASE FROM THE SR IS CONTROLLED BY SR CA CONTENT IN AN INTEGRATIVE
MODEL OF THE CARDIAC VENTRICULAR MYOCYTE |
Saleet Jafri; Jeremy Rice |
| 14917 |
Modulation of the Cardiac Ventricular Myocyte Action Potential by Intracellular
Calcium |
Raimond Winslow; Joseph GREENSTEIN; Paul Delmar |
| 14624 |
Gene Expression Profiling by Frequency Distribution - A Bioinformatic Approach
to Characterizing Tissue Repair Dynamics |
Kenneth MCLEOD; Clinton RUBIN; Craig LARAMEE |
